Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lysmd3Q99LE3 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Gm27631-201ENSMUST00000184163 466 ntBASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Lysmd3Q99LE3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Gm14767-201ENSMUST00000121559 586 ntBASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Lysmd3Q99LE3 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lysmd3Q99LE3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
Lysmd3Q99LE3 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Lysmd3Q99LE3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Gm27306-201ENSMUST00000183970 107 ntBASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Gm44344-201ENSMUST00000200287 129 ntBASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Gm45453-201ENSMUST00000211758 853 ntBASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Dupd1-202ENSMUST00000224735 548 ntBASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.95□□□□□ -0.02
Lysmd3Q99LE3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms