Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Thumpd1Q99J36 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Thumpd1Q99J36 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Gm8584-201ENSMUST00000171982 758 ntBASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Thumpd1Q99J36 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Gm25990-201ENSMUST00000102440 86 ntBASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Thumpd1Q99J36 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms