Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Efs-202ENSMUST00000227037 2540 ntBASIC16.98■□□□□ 0.31
Col20a1Q923P0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col20a1Q923P0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Gm12859-201ENSMUST00000117834 427 ntBASIC16.97■□□□□ 0.31
Col20a1Q923P0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC16.97■□□□□ 0.31
Col20a1Q923P0 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.97■□□□□ 0.31
Col20a1Q923P0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 AC140375.2-201ENSMUST00000225283 584 ntBASIC16.97■□□□□ 0.31
Col20a1Q923P0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Gm37728-201ENSMUST00000195025 2292 ntBASIC16.97■□□□□ 0.31
Col20a1Q923P0 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col20a1Q923P0 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.96■□□□□ 0.31
Col20a1Q923P0 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gm44608-201ENSMUST00000206827 855 ntBASIC16.96■□□□□ 0.31
Col20a1Q923P0 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.96■□□□□ 0.31
Col20a1Q923P0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col20a1Q923P0 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC16.96■□□□□ 0.3
Col20a1Q923P0 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Col20a1Q923P0 Gm42612-201ENSMUST00000197986 623 ntBASIC16.96■□□□□ 0.3
Col20a1Q923P0 Gm43170-201ENSMUST00000199827 612 ntBASIC16.96■□□□□ 0.3
Col20a1Q923P0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Col20a1Q923P0 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col20a1Q923P0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col20a1Q923P0 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms