Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC16.66■□□□□ 0.26
Smc1bQ920F6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Gm6912-201ENSMUST00000117218 544 ntBASIC16.66■□□□□ 0.26
Smc1bQ920F6 Gm12859-201ENSMUST00000117834 427 ntBASIC16.66■□□□□ 0.26
Smc1bQ920F6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.66■□□□□ 0.26
Smc1bQ920F6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Gm44344-201ENSMUST00000200287 129 ntBASIC16.66■□□□□ 0.26
Smc1bQ920F6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
Smc1bQ920F6 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC16.65■□□□□ 0.26
Smc1bQ920F6 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC16.65■□□□□ 0.26
Smc1bQ920F6 Gm15483-201ENSMUST00000120338 456 ntBASIC16.65■□□□□ 0.26
Smc1bQ920F6 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC16.65■□□□□ 0.26
Smc1bQ920F6 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.65■□□□□ 0.26
Smc1bQ920F6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Smc1bQ920F6 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.64■□□□□ 0.26
Smc1bQ920F6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smc1bQ920F6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Smc1bQ920F6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Gm6539-201ENSMUST00000119157 1064 ntBASIC16.64■□□□□ 0.25
Smc1bQ920F6 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Gm27533-201ENSMUST00000183800 152 ntBASIC16.64■□□□□ 0.25
Smc1bQ920F6 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.64■□□□□ 0.25
Smc1bQ920F6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Gm15163-201ENSMUST00000120749 1302 ntBASIC16.64■□□□□ 0.25
Smc1bQ920F6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smc1bQ920F6 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.64■□□□□ 0.25
Smc1bQ920F6 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Gm15321-201ENSMUST00000121290 288 ntBASIC16.63■□□□□ 0.25
Smc1bQ920F6 Gm24694-201ENSMUST00000180054 110 ntBASIC16.63■□□□□ 0.25
Smc1bQ920F6 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Gm27663-201ENSMUST00000184839 110 ntBASIC16.63■□□□□ 0.25
Smc1bQ920F6 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.63■□□□□ 0.25
Smc1bQ920F6 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Smc1bQ920F6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.62■□□□□ 0.25
Smc1bQ920F6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms