Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Gm38225-201ENSMUST00000194001 393 ntBASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Gm43474-201ENSMUST00000196415 774 ntBASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Pcdha3Q91Y16 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Pcdha3Q91Y16 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdha3Q91Y16 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdha3Q91Y16 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0.01
Pcdha3Q91Y16 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdha3Q91Y16 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdha3Q91Y16 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdha3Q91Y16 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Pcdha3Q91Y16 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
Pcdha3Q91Y16 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm22065-201ENSMUST00000103753 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm22066-201ENSMUST00000103761 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm24932-201ENSMUST00000103763 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm24115-201ENSMUST00000103799 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm22190-201ENSMUST00000103827 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm22191-201ENSMUST00000103831 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm24721-201ENSMUST00000103849 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm28018-201ENSMUST00000103869 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm26399-201ENSMUST00000103937 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC15.08■□□□□ 0
Pcdha3Q91Y16 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm24158-201ENSMUST00000175263 71 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm25349-201ENSMUST00000177728 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm23616-201ENSMUST00000177797 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm25871-201ENSMUST00000177816 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm24752-201ENSMUST00000178240 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm24496-201ENSMUST00000178287 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm25649-201ENSMUST00000178476 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm25548-201ENSMUST00000178681 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm23147-201ENSMUST00000178841 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm26095-201ENSMUST00000179270 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm22171-201ENSMUST00000179283 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm23936-201ENSMUST00000179354 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm22619-201ENSMUST00000179516 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm25255-201ENSMUST00000179579 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm24755-201ENSMUST00000179691 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm26506-201ENSMUST00000179692 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm25086-201ENSMUST00000179931 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm23243-201ENSMUST00000180047 110 ntBASIC15.08■□□□□ 0
Pcdha3Q91Y16 Gm24659-201ENSMUST00000180212 110 ntBASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms