Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Gm6222-201ENSMUST00000120787 396 ntBASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Gm12882-201ENSMUST00000121696 517 ntBASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Pcdha9Q91Y11 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha9Q91Y11 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.33■□□□□ 0.05
Pcdha9Q91Y11 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Pcdha9Q91Y11 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdha9Q91Y11 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha9Q91Y11 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha9Q91Y11 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Pcdha9Q91Y11 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha9Q91Y11 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Pcdha9Q91Y11 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Gm37812-201ENSMUST00000195216 2475 ntBASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Pcdha9Q91Y11 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Gm6415-201ENSMUST00000118488 348 ntBASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Gm9719-201ENSMUST00000162765 543 ntBASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Pcdha9Q91Y11 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms