Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhb1Q91Y08 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Gm38225-201ENSMUST00000194001 393 ntBASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhb1Q91Y08 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Gm11594-201ENSMUST00000122313 162 ntBASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.98□□□□□ -0.01
Pcdhb1Q91Y08 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Pcdhb1Q91Y08 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdhb1Q91Y08 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms