Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Gm8097-201ENSMUST00000117903 829 ntBASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Mrgpra4-201ENSMUST00000087092 1259 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Pcdhb3Q91XZ7 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Gm13418-201ENSMUST00000119097 944 ntBASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Gm12350-201ENSMUST00000121208 462 ntBASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Gm1401-201ENSMUST00000122048 772 ntBASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Gm22885-201ENSMUST00000157410 107 ntBASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Gm7230-201ENSMUST00000173026 815 ntBASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 AC154634.3-201ENSMUST00000224589 736 ntBASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Pcdhb3Q91XZ7 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb3Q91XZ7 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb3Q91XZ7 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb3Q91XZ7 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.46□□□□□ -0.1
Pcdhb3Q91XZ7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb3Q91XZ7 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdhb3Q91XZ7 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb3Q91XZ7 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Pcdhb3Q91XZ7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Pcdhb3Q91XZ7 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 AC107452.3-201ENSMUST00000228807 1308 ntBASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 4933405E24Rik-201ENSMUST00000131019 1078 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Gm19164-201ENSMUST00000210667 640 ntBASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Pcdhb3Q91XZ7 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Gm8344-201ENSMUST00000119813 856 ntBASIC14.44□□□□□ -0.1
Pcdhb3Q91XZ7 Gm13366-201ENSMUST00000122198 970 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms