Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Pcdhb5Q91XZ5 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 AC166574.6-201ENSMUST00000227889 1806 ntBASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 AC155286.1-201ENSMUST00000218632 448 ntBASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Pcdhb5Q91XZ5 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Gm21470-201ENSMUST00000187680 696 ntBASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pcdhb5Q91XZ5 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Gm11918-201ENSMUST00000121660 179 ntBASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pcdhb5Q91XZ5 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms