Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm25287-201ENSMUST00000103846 110 ntBASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm22918-201ENSMUST00000103855 110 ntBASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm6973-201ENSMUST00000117080 721 ntBASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm15920-201ENSMUST00000118998 402 ntBASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm13365-201ENSMUST00000121188 973 ntBASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm37171-201ENSMUST00000192636 1185 ntBASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pcdhga4Q91XY4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pcdhga4Q91XY4 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm44335-201ENSMUST00000196879 141 ntBASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm44297-201ENSMUST00000198304 141 ntBASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm44346-201ENSMUST00000198851 141 ntBASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.21□□□□□ -0.13
Pcdhga4Q91XY4 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms