Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Gm6007-201ENSMUST00000208170 823 ntBASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.39□□□□□ -0.11
Pcdhga6Q91XY2 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Gm29667-201ENSMUST00000190817 490 ntBASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Gm9908-201ENSMUST00000211534 448 ntBASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Gm15823-201ENSMUST00000064305 670 ntBASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdhga6Q91XY2 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Gm12138-201ENSMUST00000122180 951 ntBASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Gm20445-201ENSMUST00000061905 565 ntBASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Pcdhga6Q91XY2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms