Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vsx1Q91V10 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vsx1Q91V10 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Mir1982-201ENSMUST00000157368 74 ntBASIC14.25□□□□□ -0.13
Vsx1Q91V10 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 AC238811.3-201ENSMUST00000225422 709 ntBASIC14.25□□□□□ -0.13
Vsx1Q91V10 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Vsx1Q91V10 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Gm4984-201ENSMUST00000115987 360 ntBASIC14.24□□□□□ -0.13
Vsx1Q91V10 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vsx1Q91V10 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vsx1Q91V10 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Gm12742-201ENSMUST00000117326 410 ntBASIC14.23□□□□□ -0.13
Vsx1Q91V10 Gm15678-201ENSMUST00000117573 960 ntBASIC14.23□□□□□ -0.13
Vsx1Q91V10 Gm12957-201ENSMUST00000117835 377 ntBASIC14.23□□□□□ -0.13
Vsx1Q91V10 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.23□□□□□ -0.13
Vsx1Q91V10 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.23□□□□□ -0.13
Vsx1Q91V10 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Gm9229-201ENSMUST00000222777 126 ntBASIC14.23□□□□□ -0.13
Vsx1Q91V10 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vsx1Q91V10 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms