Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.96□□□□□ -0.33
Odf4Q8VI88 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.96□□□□□ -0.33
Odf4Q8VI88 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Gm7286-201ENSMUST00000182691 1007 ntBASIC12.96□□□□□ -0.33
Odf4Q8VI88 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Chchd1-203ENSMUST00000224633 557 ntBASIC12.96□□□□□ -0.33
Odf4Q8VI88 AC159295.1-201ENSMUST00000225326 940 ntBASIC12.96□□□□□ -0.33
Odf4Q8VI88 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Odf4Q8VI88 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Odf4Q8VI88 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Odf4Q8VI88 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC12.96□□□□□ -0.34
Odf4Q8VI88 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Odf4Q8VI88 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Odf4Q8VI88 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Odf4Q8VI88 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC12.96□□□□□ -0.34
Odf4Q8VI88 Gm28182-201ENSMUST00000188354 2477 ntBASIC12.96□□□□□ -0.34
Odf4Q8VI88 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Odf4Q8VI88 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.95□□□□□ -0.34
Odf4Q8VI88 Gm13597-201ENSMUST00000121239 375 ntBASIC12.95□□□□□ -0.34
Odf4Q8VI88 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Odf4Q8VI88 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Gm10576-201ENSMUST00000191927 825 ntBASIC12.95□□□□□ -0.34
Odf4Q8VI88 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.95□□□□□ -0.34
Odf4Q8VI88 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Odf4Q8VI88 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.94□□□□□ -0.34
Odf4Q8VI88 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.94□□□□□ -0.34
Odf4Q8VI88 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.94□□□□□ -0.34
Odf4Q8VI88 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.94□□□□□ -0.34
Odf4Q8VI88 Gm17968-201ENSMUST00000194902 784 ntBASIC12.94□□□□□ -0.34
Odf4Q8VI88 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.94□□□□□ -0.34
Odf4Q8VI88 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.94□□□□□ -0.34
Odf4Q8VI88 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Odf4Q8VI88 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Odf4Q8VI88 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms