Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trim60Q8VI40 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Gm13233-201ENSMUST00000118760 1443 ntBASIC14.93□□□□□ -0.02
Trim60Q8VI40 Gm13244-201ENSMUST00000118855 1446 ntBASIC14.93□□□□□ -0.02
Trim60Q8VI40 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Gm27628-201ENSMUST00000184911 107 ntBASIC14.93□□□□□ -0.02
Trim60Q8VI40 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trim60Q8VI40 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Gm45098-201ENSMUST00000207179 657 ntBASIC14.92□□□□□ -0.02
Trim60Q8VI40 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.92□□□□□ -0.02
Trim60Q8VI40 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trim60Q8VI40 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trim60Q8VI40 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms