Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Slc6a20aQ8VDB9 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Slc6a20aQ8VDB9 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Slc6a20aQ8VDB9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Gm21451-201ENSMUST00000111062 2775 ntBASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Gm27525-201ENSMUST00000184465 107 ntBASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Slc6a20aQ8VDB9 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Gm11025-201ENSMUST00000140773 466 ntBASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Gm10175-201ENSMUST00000086013 645 ntBASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Slc6a20aQ8VDB9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Gpr146-202ENSMUST00000053120 1040 ntBASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Slc6a20aQ8VDB9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a20aQ8VDB9 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a20aQ8VDB9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a20aQ8VDB9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.21□□□□□ -0.13
Slc6a20aQ8VDB9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a20aQ8VDB9 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a20aQ8VDB9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Slc6a20aQ8VDB9 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a20aQ8VDB9 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Slc6a20aQ8VDB9 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms