Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC14.47□□□□□ -0.09
Vps39Q8R5L3 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Gm45098-201ENSMUST00000207179 657 ntBASIC14.46□□□□□ -0.09
Vps39Q8R5L3 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps39Q8R5L3 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps39Q8R5L3 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps39Q8R5L3 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 AC159295.1-201ENSMUST00000225326 940 ntBASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Vps39Q8R5L3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms