Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Top1mtQ8R4U6 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Gm18889-201ENSMUST00000174284 929 ntBASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Gm38225-201ENSMUST00000194001 393 ntBASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Top1mtQ8R4U6 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Top1mtQ8R4U6 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Top1mtQ8R4U6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Top1mtQ8R4U6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Top1mtQ8R4U6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Top1mtQ8R4U6 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Top1mtQ8R4U6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Top1mtQ8R4U6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Top1mtQ8R4U6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Top1mtQ8R4U6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms