Protein–RNA interactions for Protein: Q8R3A2

Cdpf1, Cysteine-rich DPF motif domain-containing protein 1, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdpf1Q8R3A2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Cdpf1Q8R3A2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Cdpf1Q8R3A2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Gm6007-201ENSMUST00000208170 823 ntBASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Gm18624-201ENSMUST00000220966 658 ntBASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Cdpf1Q8R3A2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm6222-201ENSMUST00000120787 396 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm29310-201ENSMUST00000185468 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21825-201ENSMUST00000185728 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm29109-201ENSMUST00000185895 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21896-201ENSMUST00000186520 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21873-201ENSMUST00000186728 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21794-201ENSMUST00000187056 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21880-201ENSMUST00000187275 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21826-201ENSMUST00000187451 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21198-201ENSMUST00000188393 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21749-201ENSMUST00000189343 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21901-201ENSMUST00000189568 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm29424-201ENSMUST00000189716 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm28599-201ENSMUST00000189838 694 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21867-201ENSMUST00000189917 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm29269-201ENSMUST00000190087 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21722-201ENSMUST00000190153 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm28423-201ENSMUST00000190701 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21899-201ENSMUST00000190745 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21910-201ENSMUST00000191163 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21849-201ENSMUST00000191571 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm28678-201ENSMUST00000191593 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm20910-201ENSMUST00000193268 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm21871-201ENSMUST00000194621 696 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm7390-201ENSMUST00000212452 1216 ntBASIC12.03□□□□□ -0.48
Cdpf1Q8R3A2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms