Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Gm14767-201ENSMUST00000121559 586 ntBASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 AA619741-201ENSMUST00000195095 646 ntBASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Rpp40Q8R1F9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Gm12151-201ENSMUST00000121374 290 ntBASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Rpp40Q8R1F9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Gm12882-201ENSMUST00000121696 517 ntBASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Gm9063-201ENSMUST00000223299 582 ntBASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Rpp40Q8R1F9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Rpp40Q8R1F9 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rpp40Q8R1F9 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms