Protein–RNA interactions for Protein: Q8R0W6

Ndfip1, NEDD4 family-interacting protein 1, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndfip1Q8R0W6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ndfip1Q8R0W6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ndfip1Q8R0W6 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm15173-201ENSMUST00000122049 433 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm9726-201ENSMUST00000180321 678 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44357-201ENSMUST00000195897 142 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm19658-201ENSMUST00000196231 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44367-201ENSMUST00000196836 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44350-201ENSMUST00000197197 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44390-201ENSMUST00000197533 144 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44313-201ENSMUST00000198018 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44486-201ENSMUST00000198508 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44314-201ENSMUST00000199263 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44394-201ENSMUST00000199558 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44484-201ENSMUST00000199873 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44466-201ENSMUST00000200264 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm44359-201ENSMUST00000200671 138 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm6376-201ENSMUST00000209407 580 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gm18246-201ENSMUST00000221023 728 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Rps4l-201ENSMUST00000071745 943 ntBASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ndfip1Q8R0W6 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms