Protein–RNA interactions for Protein: Q8R0S1

Atf7, Cyclic AMP-dependent transcription factor ATF-7, mousemouse

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf7Q8R0S1 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Atf7Q8R0S1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf7Q8R0S1 CT943659.1-201ENSMUST00000215459 326 ntBASIC17.02■□□□□ 0.32
Atf7Q8R0S1 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf7Q8R0S1 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Atf7Q8R0S1 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.02■□□□□ 0.31
Atf7Q8R0S1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Atf7Q8R0S1 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
Atf7Q8R0S1 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Atf7Q8R0S1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.02■□□□□ 0.31
Atf7Q8R0S1 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Atf7Q8R0S1 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Gm42466-201ENSMUST00000202099 1301 ntBASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf7Q8R0S1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17■□□□□ 0.31
Atf7Q8R0S1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Atf7Q8R0S1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Atf7Q8R0S1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17■□□□□ 0.31
Atf7Q8R0S1 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Atf7Q8R0S1 Gm5648-201ENSMUST00000122244 1587 ntBASIC17■□□□□ 0.31
Atf7Q8R0S1 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17■□□□□ 0.31
Atf7Q8R0S1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Atf7Q8R0S1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf7Q8R0S1 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.99■□□□□ 0.31
Atf7Q8R0S1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 218.5 ms