Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Gm9726-201ENSMUST00000180321 678 ntBASIC15.15■□□□□ 0.02
Trim61Q8JZK6 AL593843.1-201ENSMUST00000195891 145 ntBASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trim61Q8JZK6 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.14■□□□□ 0.01
Trim61Q8JZK6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trim61Q8JZK6 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Camk2g-217ENSMUST00000226630 1937 ntBASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Gm28631-201ENSMUST00000190740 334 ntBASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Gm42790-201ENSMUST00000201268 969 ntBASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Gm9229-201ENSMUST00000222777 126 ntBASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim61Q8JZK6 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim61Q8JZK6 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms