Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 CT030657.3-201ENSMUST00000222707 1200 ntBASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim52Q8CDV4 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Gm43433-201ENSMUST00000196573 481 ntBASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trim52Q8CDV4 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Gm43438-201ENSMUST00000198133 379 ntBASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Gm18905-201ENSMUST00000205454 928 ntBASIC17.67■□□□□ 0.42
Trim52Q8CDV4 AC155252.1-201ENSMUST00000226462 1208 ntBASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim52Q8CDV4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Gm14127-201ENSMUST00000117906 678 ntBASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Gm15806-201ENSMUST00000120696 955 ntBASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Gm28911-201ENSMUST00000188837 117 ntBASIC17.66■□□□□ 0.42
Trim52Q8CDV4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Cdk7-205ENSMUST00000225990 1159 ntBASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Trim52Q8CDV4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim52Q8CDV4 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms