Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Gm7222-201ENSMUST00000117512 906 ntBASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Gm8584-201ENSMUST00000171982 758 ntBASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Lysmd4Q8CC84 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Gm6944-201ENSMUST00000182449 1006 ntBASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Gm43347-201ENSMUST00000200226 580 ntBASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Gm45167-201ENSMUST00000208007 322 ntBASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.92□□□□□ -0.34
Lysmd4Q8CC84 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Lysmd4Q8CC84 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms