Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Gm43205-201ENSMUST00000198622 1968 ntBASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Alx1Q8C8B0 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 AC115735.4-201ENSMUST00000227460 1944 ntBASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Gm7820-201ENSMUST00000121012 1052 ntBASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 AC139350.3-201ENSMUST00000226151 420 ntBASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Alx1Q8C8B0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.78■□□□□ 0.28
Alx1Q8C8B0 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Alx1Q8C8B0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Gm3436-201ENSMUST00000179930 840 ntBASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Alx1Q8C8B0 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Alx1Q8C8B0 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Alx1Q8C8B0 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Alx1Q8C8B0 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Alx1Q8C8B0 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC16.77■□□□□ 0.27
Alx1Q8C8B0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms