Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mir6990-201ENSMUST00000183724 91 ntBASIC15.9■□□□□ 0.14
Trim9Q8C7M3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Trim9Q8C7M3 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm13015-201ENSMUST00000118674 204 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm14822-201ENSMUST00000122247 291 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm24513-201ENSMUST00000174964 138 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm29310-201ENSMUST00000185468 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21825-201ENSMUST00000185728 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm29109-201ENSMUST00000185895 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21896-201ENSMUST00000186520 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21873-201ENSMUST00000186728 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21794-201ENSMUST00000187056 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21880-201ENSMUST00000187275 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21826-201ENSMUST00000187451 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21198-201ENSMUST00000188393 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21749-201ENSMUST00000189343 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21901-201ENSMUST00000189568 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm29424-201ENSMUST00000189716 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm28599-201ENSMUST00000189838 694 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21867-201ENSMUST00000189917 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm29269-201ENSMUST00000190087 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21722-201ENSMUST00000190153 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm28423-201ENSMUST00000190701 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21899-201ENSMUST00000190745 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21910-201ENSMUST00000191163 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21849-201ENSMUST00000191571 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm28678-201ENSMUST00000191593 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm20910-201ENSMUST00000193268 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm21871-201ENSMUST00000194621 696 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim9Q8C7M3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Gm27397-201ENSMUST00000184997 107 ntBASIC15.88■□□□□ 0.13
Trim9Q8C7M3 AC131710.1-201ENSMUST00000228336 990 ntBASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trim9Q8C7M3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms