Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Col6a6Q8C6K9 Gm15198-201ENSMUST00000117283 177 ntBASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Gm8399-201ENSMUST00000082300 1117 ntBASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
Col6a6Q8C6K9 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Col6a6Q8C6K9 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Gm13392-201ENSMUST00000117708 150 ntBASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.96□□□□□ -0.34
Col6a6Q8C6K9 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Col6a6Q8C6K9 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms