Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Ccdc60Q8C4J0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ccdc60Q8C4J0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
Ccdc60Q8C4J0 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Ccdc60Q8C4J0 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 AC123645.1-201ENSMUST00000228469 605 ntBASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Fgf17-202ENSMUST00000227123 1336 ntBASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Ccdc60Q8C4J0 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Gm7336-201ENSMUST00000107041 1232 ntBASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Gm6415-201ENSMUST00000118488 348 ntBASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Ccdc60Q8C4J0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ccdc60Q8C4J0 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms