Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Sh3rf3Q8C120 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Gm19863-201ENSMUST00000192480 2218 ntBASIC15.04■□□□□ -0
Sh3rf3Q8C120 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC15.04■□□□□ -0
Sh3rf3Q8C120 CT943659.1-201ENSMUST00000215459 326 ntBASIC15.04■□□□□ -0
Sh3rf3Q8C120 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.04■□□□□ -0
Sh3rf3Q8C120 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Sh3rf3Q8C120 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Gm14822-201ENSMUST00000122247 291 ntBASIC15.03■□□□□ -0
Sh3rf3Q8C120 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.03■□□□□ -0
Sh3rf3Q8C120 AC124549.3-201ENSMUST00000225541 367 ntBASIC15.03■□□□□ -0
Sh3rf3Q8C120 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Sh3rf3Q8C120 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.02■□□□□ -0
Sh3rf3Q8C120 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Gm13332-201ENSMUST00000120451 1398 ntBASIC15.02■□□□□ -0
Sh3rf3Q8C120 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.02■□□□□ -0
Sh3rf3Q8C120 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms