Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.89□□□□□ -0.03
Trub1Q8C0D0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trub1Q8C0D0 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Mir1895-201ENSMUST00000122615 79 ntBASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trub1Q8C0D0 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Gm18889-201ENSMUST00000174284 929 ntBASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Gm38225-201ENSMUST00000194001 393 ntBASIC14.87□□□□□ -0.03
Trub1Q8C0D0 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.87□□□□□ -0.03
Trub1Q8C0D0 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trub1Q8C0D0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.86□□□□□ -0.03
Trub1Q8C0D0 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trub1Q8C0D0 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms