Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3rf2Q8BZT2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Gm9522-201ENSMUST00000182394 926 ntBASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3rf2Q8BZT2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3rf2Q8BZT2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf2Q8BZT2 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf2Q8BZT2 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf2Q8BZT2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf2Q8BZT2 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf2Q8BZT2 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3rf2Q8BZT2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Sh3rf2Q8BZT2 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 97.2 ms