Protein–RNA interactions for Protein: Q8BLA8

Trpa1, Transient receptor potential cation channel subfamily A member 1, mousemouse

Predictions only

Length 1,125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpa1Q8BLA8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Nudt18-203ENSMUST00000228768 1578 ntBASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Mir6990-201ENSMUST00000183724 91 ntBASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trpa1Q8BLA8 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 CT025626.1-201ENSMUST00000223735 1455 ntBASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Nupl1-207ENSMUST00000225311 2475 ntBASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trpa1Q8BLA8 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Gm14701-201ENSMUST00000117156 348 ntBASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Gm43474-201ENSMUST00000196415 774 ntBASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Gm43125-201ENSMUST00000201724 730 ntBASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trpa1Q8BLA8 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trpa1Q8BLA8 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trpa1Q8BLA8 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trpa1Q8BLA8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms