Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Usp54Q8BL06 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Gm12203-201ENSMUST00000118235 598 ntBASIC20.16■□□□□ 0.82
Usp54Q8BL06 Gm12209-201ENSMUST00000120089 596 ntBASIC20.16■□□□□ 0.82
Usp54Q8BL06 Gm16177-201ENSMUST00000120728 718 ntBASIC20.16■□□□□ 0.82
Usp54Q8BL06 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Gm22331-201ENSMUST00000158066 136 ntBASIC20.16■□□□□ 0.82
Usp54Q8BL06 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Mir8109-201ENSMUST00000184375 117 ntBASIC20.16■□□□□ 0.82
Usp54Q8BL06 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC20.16■□□□□ 0.82
Usp54Q8BL06 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Gm9823-201ENSMUST00000051212 327 ntBASIC20.16■□□□□ 0.82
Usp54Q8BL06 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC20.16■□□□□ 0.82
Usp54Q8BL06 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC20.15■□□□□ 0.82
Usp54Q8BL06 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Usp54Q8BL06 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Usp54Q8BL06 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp54Q8BL06 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Usp54Q8BL06 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Gm5187-201ENSMUST00000117317 991 ntBASIC20.14■□□□□ 0.81
Usp54Q8BL06 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Gm3809-201ENSMUST00000180973 1006 ntBASIC20.14■□□□□ 0.81
Usp54Q8BL06 Gm29649-201ENSMUST00000185649 419 ntBASIC20.14■□□□□ 0.81
Usp54Q8BL06 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Gm6159-201ENSMUST00000191249 1724 ntBASIC20.14■□□□□ 0.81
Usp54Q8BL06 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC20.14■□□□□ 0.81
Usp54Q8BL06 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Gm9347-201ENSMUST00000211473 1607 ntBASIC20.13■□□□□ 0.81
Usp54Q8BL06 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Gm10156-201ENSMUST00000122364 462 ntBASIC20.13■□□□□ 0.81
Usp54Q8BL06 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Usp54Q8BL06 Gm18222-201ENSMUST00000202416 1387 ntBASIC20.12■□□□□ 0.81
Usp54Q8BL06 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC20.12■□□□□ 0.81
Usp54Q8BL06 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC20.12■□□□□ 0.81
Usp54Q8BL06 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Usp54Q8BL06 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms