Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.08■□□□□ 0
Ccdc40Q8BI79 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.07■□□□□ 0
Ccdc40Q8BI79 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC15.07■□□□□ 0
Ccdc40Q8BI79 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC15.07■□□□□ 0
Ccdc40Q8BI79 Gm10154-201ENSMUST00000084445 354 ntBASIC15.07■□□□□ 0
Ccdc40Q8BI79 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC15.07■□□□□ 0
Ccdc40Q8BI79 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc40Q8BI79 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc40Q8BI79 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc40Q8BI79 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ccdc40Q8BI79 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc40Q8BI79 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc40Q8BI79 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ccdc40Q8BI79 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc40Q8BI79 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Ccdc40Q8BI79 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc40Q8BI79 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Gm16198-201ENSMUST00000118766 670 ntBASIC15.05■□□□□ -0
Ccdc40Q8BI79 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Gm9727-201ENSMUST00000161387 555 ntBASIC15.05■□□□□ -0
Ccdc40Q8BI79 Gm16026-204ENSMUST00000162652 683 ntBASIC15.05■□□□□ -0
Ccdc40Q8BI79 Gm8597-201ENSMUST00000191525 1109 ntBASIC15.05■□□□□ -0
Ccdc40Q8BI79 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC15.05■□□□□ -0
Ccdc40Q8BI79 Gm5364-201ENSMUST00000216789 889 ntBASIC15.05■□□□□ -0
Ccdc40Q8BI79 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.05■□□□□ -0
Ccdc40Q8BI79 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc40Q8BI79 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms