Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Gm45167-201ENSMUST00000208007 322 ntBASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Upk3bQ80YF6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Upk3bQ80YF6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.2□□□□□ -0.46
Upk3bQ80YF6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Gm2451-201ENSMUST00000199447 999 ntBASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Gm10290-201ENSMUST00000200451 999 ntBASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Upk3bQ80YF6 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Gm43935-201ENSMUST00000203569 1050 ntBASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Olfr286-202ENSMUST00000205305 969 ntBASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.19□□□□□ -0.46
Upk3bQ80YF6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms