Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Prdm4Q80V63 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Prdm4Q80V63 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Prdm4Q80V63 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Prdm4Q80V63 Gm7935-201ENSMUST00000100555 1278 ntBASIC15.05■□□□□ -0
Prdm4Q80V63 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC15.05■□□□□ -0
Prdm4Q80V63 Gm18622-201ENSMUST00000219361 595 ntBASIC15.05■□□□□ -0
Prdm4Q80V63 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Prdm4Q80V63 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Prdm4Q80V63 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Prdm4Q80V63 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.04■□□□□ -0
Prdm4Q80V63 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.04■□□□□ -0
Prdm4Q80V63 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Prdm4Q80V63 Mir8098-201ENSMUST00000184011 137 ntBASIC15.04■□□□□ -0
Prdm4Q80V63 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Prdm4Q80V63 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.04■□□□□ -0
Prdm4Q80V63 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Prdm4Q80V63 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.03■□□□□ -0
Prdm4Q80V63 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Gm7669-201ENSMUST00000210184 1603 ntBASIC15.03■□□□□ -0
Prdm4Q80V63 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Prdm4Q80V63 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC15.03■□□□□ -0
Prdm4Q80V63 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Prdm4Q80V63 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC15.03■□□□□ -0
Prdm4Q80V63 Gm27459-201ENSMUST00000184860 107 ntBASIC15.03■□□□□ -0
Prdm4Q80V63 Gm43347-201ENSMUST00000200226 580 ntBASIC15.03■□□□□ -0
Prdm4Q80V63 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Gm30437-201ENSMUST00000206086 1201 ntBASIC15.03■□□□□ -0
Prdm4Q80V63 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.03■□□□□ -0
Prdm4Q80V63 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.03■□□□□ -0
Prdm4Q80V63 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.03■□□□□ -0
Prdm4Q80V63 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prdm4Q80V63 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC15.02■□□□□ -0
Prdm4Q80V63 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.02■□□□□ -0
Prdm4Q80V63 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.02■□□□□ -0
Prdm4Q80V63 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prdm4Q80V63 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm4Q80V63 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm4Q80V63 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm4Q80V63 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm4Q80V63 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prdm4Q80V63 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms