Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Gm43575-201ENSMUST00000196420 516 ntBASIC14.41□□□□□ -0.1
Rpp38Q80UU2 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpp38Q80UU2 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Gm5312-201ENSMUST00000203728 547 ntBASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Gm8396-201ENSMUST00000057361 823 ntBASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rpp38Q80UU2 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Gm5566-201ENSMUST00000116118 459 ntBASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Gm15957-201ENSMUST00000118893 974 ntBASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Gm6222-201ENSMUST00000120787 396 ntBASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Gm24158-201ENSMUST00000175263 71 ntBASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 AA619741-201ENSMUST00000195095 646 ntBASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 BC001981-202ENSMUST00000191393 1545 ntBASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Ap5m1-205ENSMUST00000227431 3757 ntBASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpp38Q80UU2 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpp38Q80UU2 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rpp38Q80UU2 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.38□□□□□ -0.11
Rpp38Q80UU2 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpp38Q80UU2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpp38Q80UU2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpp38Q80UU2 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpp38Q80UU2 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms