Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.2□□□□□ -0.46
Ubr5Q80TP3 CT009718.3-201ENSMUST00000221116 367 ntBASIC12.2□□□□□ -0.46
Ubr5Q80TP3 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Ubr5Q80TP3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Gm22334-201ENSMUST00000158070 133 ntBASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Gm18027-201ENSMUST00000218947 619 ntBASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Itm2b-204ENSMUST00000228637 783 ntBASIC12.19□□□□□ -0.46
Ubr5Q80TP3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Gm25261-201ENSMUST00000157416 134 ntBASIC12.19□□□□□ -0.46
Ubr5Q80TP3 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Ubr5Q80TP3 Gm45760-201ENSMUST00000212190 1782 ntBASIC12.18□□□□□ -0.46
Ubr5Q80TP3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Gm2991-201ENSMUST00000173338 480 ntBASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Gm27320-201ENSMUST00000184892 109 ntBASIC12.18□□□□□ -0.46
Ubr5Q80TP3 AC132384.14-201ENSMUST00000219346 1147 ntBASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Ubr5Q80TP3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Ubr5Q80TP3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubr5Q80TP3 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Ubr5Q80TP3 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms