Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Gm18057-201ENSMUST00000208220 503 ntBASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 AC166341.4-201ENSMUST00000220625 123 ntBASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Sh3d21Q7TSG5 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Gm23547-201ENSMUST00000158210 271 ntBASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Gm5628-201ENSMUST00000222318 1049 ntBASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sh3d21Q7TSG5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Gm18737-201ENSMUST00000173594 937 ntBASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.78■□□□□ 0.12
Sh3d21Q7TSG5 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.77■□□□□ 0.12
Sh3d21Q7TSG5 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3d21Q7TSG5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3d21Q7TSG5 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3d21Q7TSG5 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3d21Q7TSG5 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sh3d21Q7TSG5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms