Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shc4Q6S5L9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.49□□□□□ -0.25
Shc4Q6S5L9 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Gm6944-201ENSMUST00000182449 1006 ntBASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Gm29541-201ENSMUST00000191351 678 ntBASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Gm38294-201ENSMUST00000192831 381 ntBASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Shc4Q6S5L9 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Shc4Q6S5L9 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shc4Q6S5L9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shc4Q6S5L9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.47□□□□□ -0.25
Shc4Q6S5L9 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shc4Q6S5L9 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shc4Q6S5L9 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shc4Q6S5L9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Shc4Q6S5L9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shc4Q6S5L9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Shc4Q6S5L9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 68.1 ms