Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.13□□□□□ -0.47
Rif1Q6PR54 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Gm16479-201ENSMUST00000121706 932 ntBASIC12.13□□□□□ -0.47
Rif1Q6PR54 n-R5s14-201ENSMUST00000122688 107 ntBASIC12.13□□□□□ -0.47
Rif1Q6PR54 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.13□□□□□ -0.47
Rif1Q6PR54 Gm27320-201ENSMUST00000184892 109 ntBASIC12.13□□□□□ -0.47
Rif1Q6PR54 Gm9540-201ENSMUST00000188230 478 ntBASIC12.13□□□□□ -0.47
Rif1Q6PR54 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rif1Q6PR54 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.12□□□□□ -0.47
Rif1Q6PR54 Gm10156-201ENSMUST00000122364 462 ntBASIC12.12□□□□□ -0.47
Rif1Q6PR54 Gm27682-201ENSMUST00000183930 110 ntBASIC12.12□□□□□ -0.47
Rif1Q6PR54 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC12.12□□□□□ -0.47
Rif1Q6PR54 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Rif1Q6PR54 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm16177-201ENSMUST00000120728 718 ntBASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm10752-201ENSMUST00000218348 729 ntBASIC12.11□□□□□ -0.47
Rif1Q6PR54 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm12585-201ENSMUST00000117307 290 ntBASIC12.11□□□□□ -0.47
Rif1Q6PR54 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.11□□□□□ -0.47
Rif1Q6PR54 Gm15429-201ENSMUST00000151268 798 ntBASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms