Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.63□□□□□ -0.39
Snrnp40Q6PE01 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Gm12882-201ENSMUST00000121696 517 ntBASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Gm5425-201ENSMUST00000214125 459 ntBASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Snrnp40Q6PE01 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Gm27486-201ENSMUST00000184923 80 ntBASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Gm45331-201ENSMUST00000209868 554 ntBASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Snrnp40Q6PE01 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.9 ms