Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Gm27742-201ENSMUST00000184667 60 ntBASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rnf220Q6PDX6 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Gm14722-201ENSMUST00000118943 689 ntBASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Olfr129-201ENSMUST00000122318 993 ntBASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Rnf220Q6PDX6 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Rnf220Q6PDX6 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms