Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Mir1982-201ENSMUST00000157368 74 ntBASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 AC166997.1-201ENSMUST00000225122 572 ntBASIC18.51■□□□□ 0.55
Chd4Q6PDQ2 Gm9200-201ENSMUST00000118513 1354 ntBASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Gm13612-201ENSMUST00000119276 390 ntBASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Gm24420-201ENSMUST00000176676 59 ntBASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Chd4Q6PDQ2 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Mir1938-201ENSMUST00000158746 100 ntBASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Gm44981-201ENSMUST00000205549 1943 ntBASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Gm42442-201ENSMUST00000197951 1133 ntBASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Chd4Q6PDQ2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Gm9347-201ENSMUST00000211473 1607 ntBASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
Chd4Q6PDQ2 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Gm37411-201ENSMUST00000194180 2282 ntBASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Gm29608-201ENSMUST00000190444 463 ntBASIC18.47■□□□□ 0.55
Chd4Q6PDQ2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms