Protein–RNA interactions for Protein: Q69ZS0

Pdzrn3, E3 ubiquitin-protein ligase PDZRN3, mousemouse

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdzrn3Q69ZS0 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Gm6263-201ENSMUST00000120029 1342 ntBASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pdzrn3Q69ZS0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Gm46209-201ENSMUST00000217912 553 ntBASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pdzrn3Q69ZS0 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdzrn3Q69ZS0 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Pdzrn3Q69ZS0 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Gm4875-201ENSMUST00000118257 786 ntBASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Gm16476-201ENSMUST00000221544 139 ntBASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pdzrn3Q69ZS0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Gm3436-201ENSMUST00000179930 840 ntBASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Gm43433-201ENSMUST00000196573 481 ntBASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Gm43703-201ENSMUST00000200523 763 ntBASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pdzrn3Q69ZS0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms