Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.18■□□□□ 0.02
Scube3Q66PY1 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.18■□□□□ 0.02
Scube3Q66PY1 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scube3Q66PY1 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Scube3Q66PY1 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.17■□□□□ 0.02
Scube3Q66PY1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Scube3Q66PY1 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gm10275-202ENSMUST00000168697 495 ntBASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gm10275-201ENSMUST00000092620 635 ntBASIC15.16■□□□□ 0.02
Scube3Q66PY1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC15.16■□□□□ 0.02
Scube3Q66PY1 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Scube3Q66PY1 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms