Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.23■□□□□ 0.51
Clcn1Q64347 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn1Q64347 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Gm14780-201ENSMUST00000118387 2737 ntBASIC18.23■□□□□ 0.51
Clcn1Q64347 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC18.23■□□□□ 0.51
Clcn1Q64347 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Clcn1Q64347 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC18.22■□□□□ 0.51
Clcn1Q64347 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.22■□□□□ 0.51
Clcn1Q64347 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC18.22■□□□□ 0.51
Clcn1Q64347 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC18.22■□□□□ 0.51
Clcn1Q64347 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.22■□□□□ 0.51
Clcn1Q64347 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC18.22■□□□□ 0.51
Clcn1Q64347 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Clcn1Q64347 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Clcn1Q64347 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC18.22■□□□□ 0.51
Clcn1Q64347 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC18.21■□□□□ 0.51
Clcn1Q64347 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Clcn1Q64347 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
Clcn1Q64347 Gm7820-201ENSMUST00000121012 1052 ntBASIC18.21■□□□□ 0.51
Clcn1Q64347 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.21■□□□□ 0.51
Clcn1Q64347 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Mir6392-201ENSMUST00000184924 108 ntBASIC18.21■□□□□ 0.51
Clcn1Q64347 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC18.21■□□□□ 0.51
Clcn1Q64347 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Clcn1Q64347 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Clcn1Q64347 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Clcn1Q64347 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.5
Clcn1Q64347 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Clcn1Q64347 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Clcn1Q64347 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Clcn1Q64347 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Clcn1Q64347 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms