Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim27Q62158 Gm13823-201ENSMUST00000119930 345 ntBASIC17.71■□□□□ 0.43
Trim27Q62158 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim27Q62158 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim27Q62158 Gm27702-201ENSMUST00000184512 56 ntBASIC17.71■□□□□ 0.43
Trim27Q62158 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC17.71■□□□□ 0.43
Trim27Q62158 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Trim27Q62158 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim27Q62158 Gm5763-201ENSMUST00000155951 1530 ntBASIC17.71■□□□□ 0.43
Trim27Q62158 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim27Q62158 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trim27Q62158 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim27Q62158 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trim27Q62158 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim27Q62158 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trim27Q62158 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
Trim27Q62158 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trim27Q62158 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim27Q62158 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim27Q62158 Gm22065-201ENSMUST00000103753 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm22066-201ENSMUST00000103761 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm24932-201ENSMUST00000103763 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm24115-201ENSMUST00000103799 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm22190-201ENSMUST00000103827 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm22191-201ENSMUST00000103831 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm24721-201ENSMUST00000103849 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm28018-201ENSMUST00000103869 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm26399-201ENSMUST00000103937 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm25349-201ENSMUST00000177728 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm23616-201ENSMUST00000177797 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm25871-201ENSMUST00000177816 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm24752-201ENSMUST00000178240 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm24496-201ENSMUST00000178287 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm25649-201ENSMUST00000178476 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm25548-201ENSMUST00000178681 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm23147-201ENSMUST00000178841 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm26095-201ENSMUST00000179270 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm22171-201ENSMUST00000179283 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm23936-201ENSMUST00000179354 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm22619-201ENSMUST00000179516 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm25255-201ENSMUST00000179579 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm24755-201ENSMUST00000179691 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm26506-201ENSMUST00000179692 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm25086-201ENSMUST00000179931 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm23243-201ENSMUST00000180047 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm24659-201ENSMUST00000180212 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm24169-201ENSMUST00000180244 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm23689-201ENSMUST00000180354 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm27359-201ENSMUST00000184153 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm27785-201ENSMUST00000184268 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm27466-201ENSMUST00000184396 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm27703-201ENSMUST00000184836 110 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm2756-201ENSMUST00000195851 400 ntBASIC17.7■□□□□ 0.42
Trim27Q62158 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim27Q62158 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC17.7■□□□□ 0.42
Trim27Q62158 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trim27Q62158 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Trim27Q62158 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim27Q62158 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trim27Q62158 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Gm23935-201ENSMUST00000102303 57 ntBASIC17.69■□□□□ 0.42
Trim27Q62158 Gm24270-201ENSMUST00000102326 57 ntBASIC17.69■□□□□ 0.42
Trim27Q62158 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trim27Q62158 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Trim27Q62158 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim27Q62158 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Gm24245-201ENSMUST00000157318 57 ntBASIC17.69■□□□□ 0.42
Trim27Q62158 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Gm2213-201ENSMUST00000197485 688 ntBASIC17.69■□□□□ 0.42
Trim27Q62158 Gm18049-201ENSMUST00000208909 581 ntBASIC17.69■□□□□ 0.42
Trim27Q62158 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC17.69■□□□□ 0.42
Trim27Q62158 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Trim27Q62158 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trim27Q62158 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms