Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.12□□□□□ -0.63
Notch3Q61982 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.12□□□□□ -0.63
Notch3Q61982 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Notch3Q61982 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
Notch3Q61982 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC11.12□□□□□ -0.63
Notch3Q61982 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.12□□□□□ -0.63
Notch3Q61982 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Notch3Q61982 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Notch3Q61982 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Notch3Q61982 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Notch3Q61982 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Notch3Q61982 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Notch3Q61982 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Notch3Q61982 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Notch3Q61982 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.11□□□□□ -0.63
Notch3Q61982 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Notch3Q61982 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Notch3Q61982 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Notch3Q61982 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Notch3Q61982 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC11.11□□□□□ -0.63
Notch3Q61982 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Notch3Q61982 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Notch3Q61982 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC11.1□□□□□ -0.63
Notch3Q61982 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.1□□□□□ -0.63
Notch3Q61982 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.1□□□□□ -0.63
Notch3Q61982 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC11.1□□□□□ -0.63
Notch3Q61982 Gm38225-201ENSMUST00000194001 393 ntBASIC11.1□□□□□ -0.63
Notch3Q61982 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Notch3Q61982 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC11.1□□□□□ -0.63
Notch3Q61982 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.1□□□□□ -0.63
Notch3Q61982 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Notch3Q61982 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.1□□□□□ -0.63
Notch3Q61982 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms