Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccne1Q61457 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ccne1Q61457 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Ccne1Q61457 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Ccne1Q61457 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Zkscan3-208ENSMUST00000224820 5398 ntBASIC18.67■□□□□ 0.58
Ccne1Q61457 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ccne1Q61457 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ccne1Q61457 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC18.67■□□□□ 0.58
Ccne1Q61457 Gm27701-201ENSMUST00000184498 110 ntBASIC18.67■□□□□ 0.58
Ccne1Q61457 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Gm44719-201ENSMUST00000206404 149 ntBASIC18.67■□□□□ 0.58
Ccne1Q61457 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Gm5035-201ENSMUST00000215581 927 ntBASIC18.67■□□□□ 0.58
Ccne1Q61457 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Ccne1Q61457 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC18.67■□□□□ 0.58
Ccne1Q61457 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Ccne1Q61457 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ccne1Q61457 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Ccne1Q61457 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.67■□□□□ 0.58
Ccne1Q61457 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC18.66■□□□□ 0.58
Ccne1Q61457 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Ccne1Q61457 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Gm28911-201ENSMUST00000188837 117 ntBASIC18.66■□□□□ 0.58
Ccne1Q61457 Gm7558-201ENSMUST00000193221 1165 ntBASIC18.66■□□□□ 0.58
Ccne1Q61457 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC18.66■□□□□ 0.58
Ccne1Q61457 Gm17795-201ENSMUST00000214505 757 ntBASIC18.66■□□□□ 0.58
Ccne1Q61457 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ccne1Q61457 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ccne1Q61457 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC18.65■□□□□ 0.58
Ccne1Q61457 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
Ccne1Q61457 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC18.65■□□□□ 0.58
Ccne1Q61457 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC18.65■□□□□ 0.58
Ccne1Q61457 Gm17150-201ENSMUST00000165577 381 ntBASIC18.65■□□□□ 0.58
Ccne1Q61457 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Mir7654-201ENSMUST00000185082 70 ntBASIC18.65■□□□□ 0.58
Ccne1Q61457 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Ccne1Q61457 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC18.65■□□□□ 0.58
Ccne1Q61457 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.65■□□□□ 0.58
Ccne1Q61457 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccne1Q61457 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.64■□□□□ 0.57
Ccne1Q61457 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC18.64■□□□□ 0.57
Ccne1Q61457 Gm6266-201ENSMUST00000203844 806 ntBASIC18.64■□□□□ 0.57
Ccne1Q61457 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC18.64■□□□□ 0.57
Ccne1Q61457 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccne1Q61457 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccne1Q61457 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
Ccne1Q61457 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
Ccne1Q61457 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccne1Q61457 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms